Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.69□□□□□ -0.38
Atf6F6VAN0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm5187-201ENSMUST00000117317 991 ntBASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm13875-201ENSMUST00000120162 282 ntBASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm23119-201ENSMUST00000158610 140 ntBASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm38002-201ENSMUST00000193255 180 ntBASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf6F6VAN0 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.68□□□□□ -0.38
Atf6F6VAN0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.68□□□□□ -0.38
Atf6F6VAN0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Gm8062-201ENSMUST00000139696 444 ntBASIC12.68□□□□□ -0.38
Atf6F6VAN0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Gm37201-201ENSMUST00000191845 523 ntBASIC12.68□□□□□ -0.38
Atf6F6VAN0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Gm45880-201ENSMUST00000213041 853 ntBASIC12.68□□□□□ -0.38
Atf6F6VAN0 Gm10076-201ENSMUST00000073238 384 ntBASIC12.68□□□□□ -0.38
Atf6F6VAN0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Atf6F6VAN0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms