Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm340F6RGI3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.03□□□□□ -0.48
Gm340F6RGI3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm8062-201ENSMUST00000139696 444 ntBASIC12.03□□□□□ -0.48
Gm340F6RGI3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.03□□□□□ -0.48
Gm340F6RGI3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.03□□□□□ -0.48
Gm340F6RGI3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.03□□□□□ -0.48
Gm340F6RGI3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Gm340F6RGI3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm340F6RGI3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm18584-201ENSMUST00000203098 964 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.02□□□□□ -0.49
Gm340F6RGI3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm340F6RGI3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm340F6RGI3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms