Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb9E9Q5G2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb9E9Q5G2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm14208-201ENSMUST00000119645 678 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm7722-201ENSMUST00000120646 741 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm14247-201ENSMUST00000120950 237 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm2260-201ENSMUST00000184965 657 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm17812-201ENSMUST00000204935 318 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm45433-201ENSMUST00000209386 247 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm18212-201ENSMUST00000211678 889 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhb9E9Q5G2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb9E9Q5G2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms