Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm27627-201ENSMUST00000183644 150 ntBASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Gm44958-201ENSMUST00000203734 736 ntBASIC12.22□□□□□ -0.45
Srp54bE9PXC0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Srp54bE9PXC0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Gm12266-201ENSMUST00000120311 962 ntBASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Gm22902-201ENSMUST00000158488 302 ntBASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Srp54bE9PXC0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Srp54bE9PXC0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm17040-202ENSMUST00000170597 889 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm27552-201ENSMUST00000183351 62 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm27844-201ENSMUST00000183613 62 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Srp54bE9PXC0 Gm37666-201ENSMUST00000194110 866 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.2□□□□□ -0.46
Srp54bE9PXC0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms