Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm18187-201ENSMUST00000196476 984 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm2594-201ENSMUST00000214774 742 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28043E0CXC2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Gm26927-201ENSMUST00000182385 965 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.41□□□□□ -0.42
Gm28043E0CXC2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28043E0CXC2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm28043E0CXC2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms