Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm9701-201ENSMUST00000077976 427 ntBASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubr4A2AN08 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm14395-201ENSMUST00000120494 563 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm14633-201ENSMUST00000121152 470 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm13608-201ENSMUST00000121807 1406 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm13071-201ENSMUST00000122237 376 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm9553-201ENSMUST00000185703 996 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm18164-201ENSMUST00000213769 927 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm18166-201ENSMUST00000215557 927 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm8618-201ENSMUST00000097570 432 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm43056-201ENSMUST00000197865 2791 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm1826-201ENSMUST00000118646 1162 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm22662-201ENSMUST00000175290 256 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm32111-201ENSMUST00000207689 846 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm21358-201ENSMUST00000191645 1659 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm8163-201ENSMUST00000122020 1060 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm43103-201ENSMUST00000199021 802 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm29783-201ENSMUST00000219398 369 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm37728-201ENSMUST00000195025 2292 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm23908-201ENSMUST00000104599 132 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm16044-201ENSMUST00000118475 450 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm17825-201ENSMUST00000206836 794 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm44065-201ENSMUST00000203184 3527 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm5989-201ENSMUST00000096092 2077 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Gm43677-201ENSMUST00000198098 2378 ntBASIC6.32□□□□□ -1.4
Ubr4A2AN08 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubr4A2AN08 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm7781-201ENSMUST00000117258 788 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm19013-201ENSMUST00000183895 1222 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms