Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cog3-203ENSMUST00000227473 4197 ntBASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc112A0AUP1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Gm9083-201ENSMUST00000120423 819 ntBASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Gm29127-201ENSMUST00000188304 517 ntBASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Gm22058-201ENSMUST00000083393 310 ntBASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc112A0AUP1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Gm12314-201ENSMUST00000118104 538 ntBASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Gm18584-201ENSMUST00000203098 964 ntBASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc112A0AUP1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc112A0AUP1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Gm44405-201ENSMUST00000198952 126 ntBASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc112A0AUP1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms