Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm11918-201ENSMUST00000121660 179 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Mir1894-201ENSMUST00000122802 81 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm4271-201ENSMUST00000174444 973 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm6244-201ENSMUST00000178732 841 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm6007-201ENSMUST00000208170 823 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm45384-201ENSMUST00000210451 277 ntBASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trbv29A0A0G2LB96 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.23□□□□□ -0.77
Trbv29A0A0G2LB96 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms