Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm21854-201ENSMUST00000179901 471 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm42550-201ENSMUST00000201553 960 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm20445-201ENSMUST00000061905 565 ntBASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm23935-201ENSMUST00000102303 57 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm24270-201ENSMUST00000102326 57 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm13616-201ENSMUST00000120600 222 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm24245-201ENSMUST00000157318 57 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm9522-201ENSMUST00000182394 926 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mir7684-201ENSMUST00000183858 60 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm27838-201ENSMUST00000184829 128 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm38223-201ENSMUST00000194484 695 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms