Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav5-4A0A075B652 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm12363-201ENSMUST00000122250 668 ntBASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm29649-201ENSMUST00000185649 419 ntBASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav5-4A0A075B652 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Snord83b-201ENSMUST00000104546 94 ntBASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Gm7561-201ENSMUST00000211203 886 ntBASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5-4A0A075B652 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms