Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 ACTBP11-201ENST00000436287 1126 ntBASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AC025279.2-201ENST00000569730 653 ntBASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CTDP1Q9Y5B0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.83■□□□□ 0.45
CTDP1Q9Y5B0 TUBB1P2-201ENST00000422712 1306 ntBASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 TUBB1P1-201ENST00000503144 1300 ntBASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 AC004066.1-201ENST00000502488 802 ntBASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 MIR4525-201ENST00000580000 75 ntBASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTDP1Q9Y5B0 LRRC59-203ENST00000576448 1531 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AC026954.1-201ENST00000429771 1293 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AC114812.1-204ENST00000449669 728 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AC022494.1-201ENST00000466044 728 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 MIR4538-201ENST00000581377 78 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AC138951.2-201ENST00000623455 1161 ntBASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.82■□□□□ 0.44
CTDP1Q9Y5B0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms