Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prg4Q9JM99 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm14017-201ENSMUST00000121934 386 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm14126-201ENSMUST00000122345 395 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.32□□□□□ -0.6
Prg4Q9JM99 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prg4Q9JM99 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.31□□□□□ -0.6
Prg4Q9JM99 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.31□□□□□ -0.6
Prg4Q9JM99 Gm43037-201ENSMUST00000196808 250 ntBASIC11.31□□□□□ -0.6
Prg4Q9JM99 Gm18212-201ENSMUST00000211678 889 ntBASIC11.31□□□□□ -0.6
Prg4Q9JM99 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.31□□□□□ -0.6
Prg4Q9JM99 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.31□□□□□ -0.6
Prg4Q9JM99 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prg4Q9JM99 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms