Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubb3Q9ERD7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm37489-201ENSMUST00000191883 159 ntBASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm5781-201ENSMUST00000219792 443 ntBASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Cts7-204ENSMUST00000225321 1257 ntBASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubb3Q9ERD7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm13350-201ENSMUST00000120519 479 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm13786-201ENSMUST00000122371 333 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm7584-201ENSMUST00000175829 940 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm42599-201ENSMUST00000201308 469 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm9257-201ENSMUST00000221254 232 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.29□□□□□ -0.44
Tubb3Q9ERD7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Gm7783-201ENSMUST00000204795 781 ntBASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms