Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smc3Q9CW03 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.53□□□□□ -0.08
Smc3Q9CW03 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc3Q9CW03 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.52□□□□□ -0.08
Smc3Q9CW03 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.52□□□□□ -0.08
Smc3Q9CW03 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smc3Q9CW03 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.52□□□□□ -0.08
Smc3Q9CW03 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm12502-201ENSMUST00000120197 444 ntBASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm16177-201ENSMUST00000120728 718 ntBASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm27682-201ENSMUST00000183930 110 ntBASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm44882-201ENSMUST00000205702 802 ntBASIC14.52□□□□□ -0.09
Smc3Q9CW03 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.52□□□□□ -0.09
Smc3Q9CW03 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Smc3Q9CW03 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc3Q9CW03 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms