Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm20121-201ENSMUST00000198547 1594 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm15236-201ENSMUST00000117309 379 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm24111-201ENSMUST00000175491 97 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm6098-201ENSMUST00000180234 330 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Retreg3Q9CQV4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm14957-201ENSMUST00000121069 817 ntBASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Mir3102-201ENSMUST00000175555 104 ntBASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm38368-201ENSMUST00000193181 1335 ntBASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retreg3Q9CQV4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms