Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Gm42612-201ENSMUST00000197986 623 ntBASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Gm43170-201ENSMUST00000199827 612 ntBASIC11.15□□□□□ -0.62
Krt88Q9CPR6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Krt88Q9CPR6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
Krt88Q9CPR6 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.15□□□□□ -0.63
Krt88Q9CPR6 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt88Q9CPR6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Krt88Q9CPR6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm24231-201ENSMUST00000104315 133 ntBASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm11618-201ENSMUST00000117946 267 ntBASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm44855-201ENSMUST00000205725 362 ntBASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Krt88Q9CPR6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Krt88Q9CPR6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Syt7-204ENSMUST00000223586 1344 ntBASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.13□□□□□ -0.63
Krt88Q9CPR6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms