Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm23270-201ENSMUST00000104055 131 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm14726-201ENSMUST00000120623 896 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm14999-201ENSMUST00000121039 624 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm27243-201ENSMUST00000183964 521 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm18304-201ENSMUST00000189162 546 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm10076-201ENSMUST00000073238 384 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rtn4rQ99PI8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm13570-201ENSMUST00000140763 309 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm26956-201ENSMUST00000182176 986 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm42937-201ENSMUST00000197360 752 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rtn4rQ99PI8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rtn4rQ99PI8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms