Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Gm17150-201ENSMUST00000165577 381 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cstf3Q99LI7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Gm27243-201ENSMUST00000183964 521 ntBASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Gm5904-201ENSMUST00000210286 865 ntBASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cstf3Q99LI7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cstf3Q99LI7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms