Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm17330-201ENSMUST00000221047 165 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Gm44975-201ENSMUST00000207435 1390 ntBASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb3Q91XZ7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm42478-201ENSMUST00000199252 1467 ntBASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm13059-201ENSMUST00000119881 398 ntBASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm43094-201ENSMUST00000196549 921 ntBASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gm45701-201ENSMUST00000212049 235 ntBASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb3Q91XZ7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm37863-201ENSMUST00000194911 1457 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm8602-201ENSMUST00000184045 607 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm27390-201ENSMUST00000184516 176 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm37973-201ENSMUST00000195767 1289 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Gm18660-201ENSMUST00000199542 629 ntBASIC12.54□□□□□ -0.4
Pcdhb3Q91XZ7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms