Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb17Q91VD8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Gm18594-201ENSMUST00000175733 1403 ntBASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhb17Q91VD8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm31123-201ENSMUST00000192094 666 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm44392-201ENSMUST00000196758 115 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm21049-201ENSMUST00000197078 987 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm43905-201ENSMUST00000204516 204 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm5307-201ENSMUST00000204772 760 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 AC123738.1-201ENSMUST00000224796 773 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 CT009728.1-201ENSMUST00000225228 1050 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 AC170810.2-201ENSMUST00000228384 1232 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhb17Q91VD8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Gm12400-201ENSMUST00000120915 1003 ntBASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Gm12291-201ENSMUST00000121627 311 ntBASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Gm22121-201ENSMUST00000175148 54 ntBASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb17Q91VD8 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms