Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Daam2-202ENSMUST00000224595 1926 ntBASIC11.33□□□□□ -0.6
Nkd2Q8VE28 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.33□□□□□ -0.6
Nkd2Q8VE28 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkd2Q8VE28 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Gm18753-201ENSMUST00000201000 566 ntBASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.32□□□□□ -0.6
Nkd2Q8VE28 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkd2Q8VE28 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Rubie-203ENSMUST00000227803 2430 ntBASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm14726-201ENSMUST00000120623 896 ntBASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkd2Q8VE28 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms