Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Gm17150-201ENSMUST00000165577 381 ntBASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cchcr1Q8K2I2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gm13736-201ENSMUST00000119272 253 ntBASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gm3890-201ENSMUST00000182416 207 ntBASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Snora73a-201ENSMUST00000082453 205 ntBASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cchcr1Q8K2I2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Gm24548-201ENSMUST00000158650 108 ntBASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cchcr1Q8K2I2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.6□□□□□ -0.07
Cchcr1Q8K2I2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cchcr1Q8K2I2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cchcr1Q8K2I2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms