Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc38Q8CDN8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm4984-201ENSMUST00000115987 360 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm7809-201ENSMUST00000153199 742 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm25261-201ENSMUST00000157416 134 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm23119-201ENSMUST00000158610 140 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm8738-201ENSMUST00000172606 329 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm18304-201ENSMUST00000189162 546 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc38Q8CDN8 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm3890-201ENSMUST00000182416 207 ntBASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm8602-201ENSMUST00000184045 607 ntBASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm6266-201ENSMUST00000203844 806 ntBASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc38Q8CDN8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc38Q8CDN8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccdc38Q8CDN8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Ccdc38Q8CDN8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms