Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rft1Q8C3B8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Gm11425-201ENSMUST00000119608 498 ntBASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Gm9396-201ENSMUST00000076703 567 ntBASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rft1Q8C3B8 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.63
Rft1Q8C3B8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rft1Q8C3B8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm14350-201ENSMUST00000116642 640 ntBASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm19931-201ENSMUST00000198920 368 ntBASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms