Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup54Q8BTS4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm13665-201ENSMUST00000120830 528 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Rprl1-202ENSMUST00000198476 238 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm44651-201ENSMUST00000207343 372 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nup54Q8BTS4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.65□□□□□ -0.39
Nup54Q8BTS4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nup54Q8BTS4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nup54Q8BTS4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Nup54Q8BTS4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nup54Q8BTS4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nup54Q8BTS4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gm15808-201ENSMUST00000119046 604 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gm19187-201ENSMUST00000206781 892 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms