Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sfr1Q8BP27 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Gm27516-201ENSMUST00000184237 98 ntBASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sfr1Q8BP27 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Gm15198-201ENSMUST00000117283 177 ntBASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Gm27023-201ENSMUST00000182372 285 ntBASIC12.65□□□□□ -0.38
Sfr1Q8BP27 Gm2546-201ENSMUST00000182630 991 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms