Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Gm29649-201ENSMUST00000185649 419 ntBASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Gm9899-201ENSMUST00000065519 555 ntBASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm12390-201ENSMUST00000117897 397 ntBASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm14704-201ENSMUST00000120300 874 ntBASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm7561-201ENSMUST00000211203 886 ntBASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.49□□□□□ -0.25
Ctdp1Q7TSG2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm10156-201ENSMUST00000122364 462 ntBASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Mir1938-201ENSMUST00000158746 100 ntBASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.48□□□□□ -0.25
Ctdp1Q7TSG2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms