Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rif1Q6PR54 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm18561-201ENSMUST00000206027 804 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm7627-201ENSMUST00000183205 999 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm37458-201ENSMUST00000194055 410 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm42816-201ENSMUST00000198433 325 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.47□□□□□ -0.73
Rif1Q6PR54 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rif1Q6PR54 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Gm15626-201ENSMUST00000117478 868 ntBASIC10.46□□□□□ -0.73
Rif1Q6PR54 Gm12663-201ENSMUST00000118481 958 ntBASIC10.46□□□□□ -0.73
Rif1Q6PR54 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rif1Q6PR54 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rif1Q6PR54 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms