Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.3□□□□□ -0.44
Sim1Q61045 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sim1Q61045 Gm16296-201ENSMUST00000159905 325 ntBASIC12.3□□□□□ -0.44
Sim1Q61045 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.3□□□□□ -0.44
Sim1Q61045 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.3□□□□□ -0.44
Sim1Q61045 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Gm8712-201ENSMUST00000221090 701 ntBASIC12.3□□□□□ -0.44
Sim1Q61045 Spcs1-203ENSMUST00000226374 592 ntBASIC12.3□□□□□ -0.44
Sim1Q61045 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Sim1Q61045 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sim1Q61045 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sim1Q61045 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sim1Q61045 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sim1Q61045 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sim1Q61045 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Sim1Q61045 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sim1Q61045 Gm15131-201ENSMUST00000119124 595 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.29□□□□□ -0.44
Sim1Q61045 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Gm43058-201ENSMUST00000197645 625 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Gm45433-201ENSMUST00000209386 247 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.29□□□□□ -0.44
Sim1Q61045 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sim1Q61045 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sim1Q61045 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm9062-201ENSMUST00000117712 727 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Gm13296-201ENSMUST00000117854 997 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm23699-201ENSMUST00000158835 135 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm8913-201ENSMUST00000209491 641 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm18730-201ENSMUST00000218038 343 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sim1Q61045 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sim1Q61045 Gm22058-201ENSMUST00000083393 310 ntBASIC12.28□□□□□ -0.44
Sim1Q61045 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sim1Q61045 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Sim1Q61045 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sim1Q61045 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sim1Q61045 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sim1Q61045 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms