Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.92□□□□□ -0.34
Satb1Q60611 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Satb1Q60611 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Satb1Q60611 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.92□□□□□ -0.34
Satb1Q60611 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Satb1Q60611 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Gm25880-201ENSMUST00000104331 132 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.91□□□□□ -0.34
Satb1Q60611 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.91□□□□□ -0.34
Satb1Q60611 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.91□□□□□ -0.34
Satb1Q60611 Mir7221-201ENSMUST00000184009 72 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 Gm32025-201ENSMUST00000217960 307 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.91□□□□□ -0.34
Satb1Q60611 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.91□□□□□ -0.34
Satb1Q60611 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.91□□□□□ -0.34
Satb1Q60611 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Satb1Q60611 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Satb1Q60611 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Satb1Q60611 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.9□□□□□ -0.34
Satb1Q60611 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Satb1Q60611 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Gm13875-201ENSMUST00000120162 282 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.9□□□□□ -0.34
Satb1Q60611 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.9□□□□□ -0.34
Satb1Q60611 Gm17889-201ENSMUST00000198410 598 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Satb1Q60611 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.9□□□□□ -0.34
Satb1Q60611 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.9□□□□□ -0.34
Satb1Q60611 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Satb1Q60611 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Satb1Q60611 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Satb1Q60611 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.9□□□□□ -0.35
Satb1Q60611 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Satb1Q60611 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.9□□□□□ -0.35
Satb1Q60611 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms