Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm5419-201ENSMUST00000119301 527 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm23218-201ENSMUST00000158124 276 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm37028-201ENSMUST00000194276 107 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm12501-201ENSMUST00000119163 529 ntBASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Mir1956-201ENSMUST00000157748 65 ntBASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm44980-201ENSMUST00000205826 314 ntBASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm807-202ENSMUST00000224929 408 ntBASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc88aQ5SNZ0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm14058-201ENSMUST00000116082 735 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Mir1901-201ENSMUST00000122616 78 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm10731-201ENSMUST00000181171 448 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm5455-201ENSMUST00000058710 715 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc88aQ5SNZ0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms