Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.51□□□□□ -0.41
Bdp1Q571C7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Gm11511-201ENSMUST00000118146 540 ntBASIC12.51□□□□□ -0.41
Bdp1Q571C7 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Bdp1Q571C7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm24279-201ENSMUST00000104236 131 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm18367-201ENSMUST00000176139 600 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm12407-201ENSMUST00000180219 324 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm5714-201ENSMUST00000197343 566 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm14807-201ENSMUST00000116640 983 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm24078-201ENSMUST00000158184 103 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm27956-201ENSMUST00000175604 260 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm45094-201ENSMUST00000207013 617 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm45085-201ENSMUST00000209100 441 ntBASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Bdp1Q571C7 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.49□□□□□ -0.41
Bdp1Q571C7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.49□□□□□ -0.41
Bdp1Q571C7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Gm10169-201ENSMUST00000121822 348 ntBASIC12.49□□□□□ -0.41
Bdp1Q571C7 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.49□□□□□ -0.41
Bdp1Q571C7 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Bdp1Q571C7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms