Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm26185-201ENSMUST00000157692 266 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm44882-201ENSMUST00000205702 802 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43aQ3TL54 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm8213-201ENSMUST00000118191 441 ntBASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm10156-201ENSMUST00000122364 462 ntBASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Rmrp-201ENSMUST00000157463 271 ntBASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm38671-201ENSMUST00000200573 130 ntBASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm24136-201ENSMUST00000083374 165 ntBASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43aQ3TL54 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms