Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trappc13Q3TIR1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trappc13Q3TIR1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm5745-201ENSMUST00000183748 313 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm45925-201ENSMUST00000218882 744 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trappc13Q3TIR1 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm11591-201ENSMUST00000120063 702 ntBASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm11424-201ENSMUST00000121929 829 ntBASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm44405-201ENSMUST00000198952 126 ntBASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trappc13Q3TIR1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms