Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm7340-201ENSMUST00000119729 2752 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gm15483-201ENSMUST00000120338 456 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gm10231-201ENSMUST00000181584 441 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gm10175-202ENSMUST00000208752 441 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.13□□□□□ -0.79
Trim63Q38HM4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim63Q38HM4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.12□□□□□ -0.79
Trim63Q38HM4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gm18164-201ENSMUST00000213769 927 ntBASIC10.12□□□□□ -0.79
Trim63Q38HM4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gm18166-201ENSMUST00000215557 927 ntBASIC10.12□□□□□ -0.79
Trim63Q38HM4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trim63Q38HM4 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms