Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.26□□□□□ -0.77
Gfra1P97785 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.26□□□□□ -0.77
Gfra1P97785 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Gfra1P97785 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm38317-201ENSMUST00000195564 343 ntBASIC10.26□□□□□ -0.77
Gfra1P97785 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.26□□□□□ -0.77
Gfra1P97785 Gm44487-201ENSMUST00000205145 325 ntBASIC10.26□□□□□ -0.77
Gfra1P97785 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.26□□□□□ -0.77
Gfra1P97785 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.26□□□□□ -0.77
Gfra1P97785 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Mir433-201ENSMUST00000093564 124 ntBASIC10.26□□□□□ -0.77
Gfra1P97785 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.26□□□□□ -0.77
Gfra1P97785 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Gfra1P97785 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.26□□□□□ -0.77
Gfra1P97785 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gfra1P97785 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gfra1P97785 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.25□□□□□ -0.77
Gfra1P97785 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gfra1P97785 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.25□□□□□ -0.77
Gfra1P97785 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.25□□□□□ -0.77
Gfra1P97785 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gfra1P97785 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.25□□□□□ -0.77
Gfra1P97785 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gfra1P97785 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.25□□□□□ -0.77
Gfra1P97785 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.25□□□□□ -0.77
Gfra1P97785 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.25□□□□□ -0.77
Gfra1P97785 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gfra1P97785 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.25□□□□□ -0.77
Gfra1P97785 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gfra1P97785 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.25□□□□□ -0.77
Gfra1P97785 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gfra1P97785 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Gfra1P97785 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gfra1P97785 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Gfra1P97785 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Gfra1P97785 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.24□□□□□ -0.77
Gfra1P97785 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Gfra1P97785 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.24□□□□□ -0.77
Gfra1P97785 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.24□□□□□ -0.77
Gfra1P97785 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gfra1P97785 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Gfra1P97785 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.24□□□□□ -0.77
Gfra1P97785 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.24□□□□□ -0.77
Gfra1P97785 Gm14130-201ENSMUST00000118417 987 ntBASIC10.24□□□□□ -0.77
Gfra1P97785 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms