Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-3P97334 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nkx2-3P97334 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm8956-201ENSMUST00000203939 825 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.47■□□□□ 0.07
Nkx2-3P97334 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.47■□□□□ 0.07
Nkx2-3P97334 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm18367-201ENSMUST00000176139 600 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm19287-201ENSMUST00000203190 358 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm9463-201ENSMUST00000206707 601 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm45398-201ENSMUST00000210561 165 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gm18041-201ENSMUST00000218210 618 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.46■□□□□ 0.07
Nkx2-3P97334 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-3P97334 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-3P97334 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-3P97334 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Nkx2-3P97334 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-3P97334 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-3P97334 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-3P97334 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.45■□□□□ 0.06
Nkx2-3P97334 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Gm13888-201ENSMUST00000119148 422 ntBASIC15.45■□□□□ 0.06
Nkx2-3P97334 Gm12899-201ENSMUST00000120565 551 ntBASIC15.45■□□□□ 0.06
Nkx2-3P97334 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.45■□□□□ 0.06
Nkx2-3P97334 Gm5706-201ENSMUST00000181525 993 ntBASIC15.45■□□□□ 0.06
Nkx2-3P97334 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms