Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Six5P70178 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Six5P70178 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Six5P70178 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.59□□□□□ -0.55
Six5P70178 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Six5P70178 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.59□□□□□ -0.55
Six5P70178 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.59□□□□□ -0.55
Six5P70178 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Six5P70178 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Six5P70178 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Six5P70178 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.59□□□□□ -0.55
Six5P70178 Gm11222-201ENSMUST00000119005 738 ntBASIC11.59□□□□□ -0.55
Six5P70178 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.59□□□□□ -0.55
Six5P70178 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.59□□□□□ -0.55
Six5P70178 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Six5P70178 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.59□□□□□ -0.55
Six5P70178 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Six5P70178 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Gm44882-201ENSMUST00000205702 802 ntBASIC11.59□□□□□ -0.55
Six5P70178 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.59□□□□□ -0.55
Six5P70178 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Six5P70178 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Six5P70178 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Six5P70178 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Six5P70178 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Six5P70178 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Six5P70178 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Six5P70178 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Six5P70178 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Six5P70178 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Six5P70178 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Six5P70178 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.58□□□□□ -0.56
Six5P70178 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Six5P70178 Gm25043-201ENSMUST00000158604 212 ntBASIC11.58□□□□□ -0.56
Six5P70178 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.58□□□□□ -0.56
Six5P70178 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.58□□□□□ -0.56
Six5P70178 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.58□□□□□ -0.56
Six5P70178 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.58□□□□□ -0.56
Six5P70178 Gm18935-201ENSMUST00000212692 664 ntBASIC11.58□□□□□ -0.56
Six5P70178 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Gm8227-201ENSMUST00000223306 571 ntBASIC11.58□□□□□ -0.56
Six5P70178 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.58□□□□□ -0.56
Six5P70178 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Gm7399-201ENSMUST00000032395 858 ntBASIC11.58□□□□□ -0.56
Six5P70178 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Six5P70178 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Six5P70178 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Six5P70178 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.57□□□□□ -0.56
Six5P70178 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Six5P70178 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms