Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm12291-201ENSMUST00000121627 311 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm18905-201ENSMUST00000205454 928 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.62□□□□□ -0.87
Ctdsp1P58466 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ctdsp1P58466 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.61□□□□□ -0.87
Ctdsp1P58466 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.61□□□□□ -0.87
Ctdsp1P58466 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.61□□□□□ -0.87
Ctdsp1P58466 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.61□□□□□ -0.87
Ctdsp1P58466 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.61□□□□□ -0.87
Ctdsp1P58466 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.61□□□□□ -0.87
Ctdsp1P58466 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ctdsp1P58466 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ctdsp1P58466 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms