Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SmoP56726 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.44□□□□□ -0.42
SmoP56726 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SmoP56726 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SmoP56726 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SmoP56726 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.43□□□□□ -0.42
SmoP56726 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SmoP56726 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.43□□□□□ -0.42
SmoP56726 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.43□□□□□ -0.42
SmoP56726 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.43□□□□□ -0.42
SmoP56726 Gm44882-201ENSMUST00000205702 802 ntBASIC12.43□□□□□ -0.42
SmoP56726 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 Gm8913-201ENSMUST00000209491 641 ntBASIC12.43□□□□□ -0.42
SmoP56726 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.43□□□□□ -0.42
SmoP56726 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SmoP56726 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.43□□□□□ -0.42
SmoP56726 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SmoP56726 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SmoP56726 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SmoP56726 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SmoP56726 Gm11989-201ENSMUST00000117240 672 ntBASIC12.42□□□□□ -0.42
SmoP56726 Gm11362-201ENSMUST00000118838 850 ntBASIC12.42□□□□□ -0.42
SmoP56726 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SmoP56726 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.42□□□□□ -0.42
SmoP56726 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SmoP56726 Gm2260-201ENSMUST00000184965 657 ntBASIC12.42□□□□□ -0.42
SmoP56726 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.42□□□□□ -0.42
SmoP56726 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.42□□□□□ -0.42
SmoP56726 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.42□□□□□ -0.42
SmoP56726 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SmoP56726 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SmoP56726 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SmoP56726 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms