Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Slc6a11P31650 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a11P31650 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.76□□□□□ -0.53
Slc6a11P31650 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Mir5132-201ENSMUST00000175166 71 ntBASIC11.76□□□□□ -0.53
Slc6a11P31650 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Gm29396-201ENSMUST00000185659 716 ntBASIC11.76□□□□□ -0.53
Slc6a11P31650 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Olfr284-202ENSMUST00000206647 966 ntBASIC11.76□□□□□ -0.53
Slc6a11P31650 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.76□□□□□ -0.53
Slc6a11P31650 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a11P31650 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.76□□□□□ -0.53
Slc6a11P31650 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a11P31650 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm23363-201ENSMUST00000175024 79 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm22121-201ENSMUST00000175148 54 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm3786-201ENSMUST00000202659 378 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.75□□□□□ -0.53
Slc6a11P31650 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a11P31650 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a11P31650 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms