Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Gm12015-201ENSMUST00000117065 843 ntBASIC14.33□□□□□ -0.12
Pde6aP27664 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.33□□□□□ -0.12
Pde6aP27664 Gm4034-201ENSMUST00000187674 480 ntBASIC14.33□□□□□ -0.12
Pde6aP27664 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pde6aP27664 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.33□□□□□ -0.12
Pde6aP27664 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pde6aP27664 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pde6aP27664 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm14644-201ENSMUST00000116671 647 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 AA914427-201ENSMUST00000193194 1166 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pde6aP27664 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.32□□□□□ -0.12
Pde6aP27664 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pde6aP27664 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.31□□□□□ -0.12
Pde6aP27664 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pde6aP27664 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.31□□□□□ -0.12
Pde6aP27664 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Gzmn-202ENSMUST00000225535 989 ntBASIC14.31□□□□□ -0.12
Pde6aP27664 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Pde6aP27664 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Pde6aP27664 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pde6aP27664 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms