Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm20426-201ENSMUST00000173657 440 ntBASIC12.6□□□□□ -0.39
Hmga1P17095 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.6□□□□□ -0.39
Hmga1P17095 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.6□□□□□ -0.39
Hmga1P17095 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Hmga1P17095 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm5369-201ENSMUST00000217499 588 ntBASIC12.6□□□□□ -0.39
Hmga1P17095 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hmga1P17095 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.6□□□□□ -0.39
Hmga1P17095 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmga1P17095 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.6□□□□□ -0.39
Hmga1P17095 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmga1P17095 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hmga1P17095 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hmga1P17095 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Gm26286-201ENSMUST00000104166 134 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Gm11331-201ENSMUST00000119764 288 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Gm23699-201ENSMUST00000158835 135 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.59□□□□□ -0.39
Hmga1P17095 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.59□□□□□ -0.39
Hmga1P17095 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Hmga1P17095 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmga1P17095 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.59□□□□□ -0.39
Hmga1P17095 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Hmga1P17095 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Hmga1P17095 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Gm23596-201ENSMUST00000104304 132 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hmga1P17095 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Gm11511-201ENSMUST00000118146 540 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hmga1P17095 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.58□□□□□ -0.4
Hmga1P17095 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Gm27530-201ENSMUST00000184096 98 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 Mir7677-201ENSMUST00000184226 67 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 Gm37986-201ENSMUST00000193285 383 ntBASIC12.58□□□□□ -0.4
Hmga1P17095 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.58□□□□□ -0.4
Hmga1P17095 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Hmga1P17095 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hmga1P17095 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Hmga1P17095 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hmga1P17095 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hmga1P17095 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.58□□□□□ -0.4
Hmga1P17095 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hmga1P17095 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmga1P17095 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms