Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TpbpaP13438 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TpbpaP13438 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.2□□□□□ -0.62
TpbpaP13438 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.2□□□□□ -0.62
TpbpaP13438 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gm13612-201ENSMUST00000119276 390 ntBASIC11.2□□□□□ -0.62
TpbpaP13438 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gm8099-201ENSMUST00000200510 742 ntBASIC11.2□□□□□ -0.62
TpbpaP13438 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TpbpaP13438 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.2□□□□□ -0.62
TpbpaP13438 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.2□□□□□ -0.62
TpbpaP13438 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.2□□□□□ -0.62
TpbpaP13438 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.2□□□□□ -0.62
TpbpaP13438 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TpbpaP13438 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TpbpaP13438 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Gm16479-201ENSMUST00000121706 932 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Gm13123-201ENSMUST00000122173 492 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.19□□□□□ -0.62
TpbpaP13438 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.19□□□□□ -0.62
TpbpaP13438 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Gm10576-201ENSMUST00000191927 825 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.19□□□□□ -0.62
TpbpaP13438 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.19□□□□□ -0.62
TpbpaP13438 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TpbpaP13438 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.19□□□□□ -0.62
TpbpaP13438 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.19□□□□□ -0.62
TpbpaP13438 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms