Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.03□□□□□ -0.8
P06323 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.03□□□□□ -0.8
P06323 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Gm22331-201ENSMUST00000158066 136 ntBASIC10.03□□□□□ -0.8
P06323 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.03□□□□□ -0.8
P06323 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.03□□□□□ -0.8
P06323 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.03□□□□□ -0.8
P06323 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.03□□□□□ -0.8
P06323 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.03□□□□□ -0.8
P06323 Gm4768-201ENSMUST00000206199 686 ntBASIC10.03□□□□□ -0.8
P06323 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
P06323 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.03□□□□□ -0.8
P06323 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
P06323 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
P06323 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.03□□□□□ -0.8
P06323 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.03□□□□□ -0.8
P06323 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06323 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06323 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06323 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06323 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06323 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
P06323 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
P06323 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06323 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06323 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.02□□□□□ -0.81
P06323 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P06323 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.02□□□□□ -0.81
P06323 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
P06323 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.02□□□□□ -0.81
P06323 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gm24196-201ENSMUST00000179161 110 ntBASIC10.02□□□□□ -0.81
P06323 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.02□□□□□ -0.81
P06323 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
P06323 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.02□□□□□ -0.81
P06323 Gm19163-201ENSMUST00000223313 780 ntBASIC10.02□□□□□ -0.81
P06323 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.02□□□□□ -0.81
P06323 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.02□□□□□ -0.81
P06323 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gm10012-201ENSMUST00000078252 192 ntBASIC10.02□□□□□ -0.81
P06323 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.02□□□□□ -0.81
P06323 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.02□□□□□ -0.81
P06323 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P06323 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06323 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.02□□□□□ -0.81
P06323 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
P06323 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.01□□□□□ -0.81
P06323 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.01□□□□□ -0.81
P06323 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.01□□□□□ -0.81
P06323 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Gm8652-201ENSMUST00000181363 964 ntBASIC10.01□□□□□ -0.81
P06323 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06323 Gm29705-201ENSMUST00000212598 474 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms