Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
PdgfrbP05622 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm12314-201ENSMUST00000118104 538 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm4986-201ENSMUST00000119731 549 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm11793-201ENSMUST00000120433 981 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PdgfrbP05622 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm43118-201ENSMUST00000199149 775 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm43084-201ENSMUST00000200696 947 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Matn2-203ENSMUST00000226766 3252 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.54□□□□□ -0.4
PdgfrbP05622 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
PdgfrbP05622 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PdgfrbP05622 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm9083-201ENSMUST00000120423 819 ntBASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm43452-201ENSMUST00000201873 991 ntBASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm10608-202ENSMUST00000213924 676 ntBASIC12.53□□□□□ -0.4
PdgfrbP05622 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm10076-201ENSMUST00000073238 384 ntBASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm24136-201ENSMUST00000083374 165 ntBASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm10478-201ENSMUST00000084451 396 ntBASIC12.53□□□□□ -0.4
PdgfrbP05622 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.53□□□□□ -0.4
PdgfrbP05622 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.53□□□□□ -0.4
PdgfrbP05622 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PdgfrbP05622 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
PdgfrbP05622 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PdgfrbP05622 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdgfrbP05622 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
PdgfrbP05622 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PdgfrbP05622 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PdgfrbP05622 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
PdgfrbP05622 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.52□□□□□ -0.4
PdgfrbP05622 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PdgfrbP05622 Cog3-203ENSMUST00000227473 4197 ntBASIC12.52□□□□□ -0.41
PdgfrbP05622 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PdgfrbP05622 Gm10434-201ENSMUST00000101158 471 ntBASIC12.52□□□□□ -0.41
PdgfrbP05622 Gm14999-201ENSMUST00000121039 624 ntBASIC12.52□□□□□ -0.41
PdgfrbP05622 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PdgfrbP05622 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.52□□□□□ -0.41
PdgfrbP05622 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms