Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.85□□□□□ -0.51
P04213 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.85□□□□□ -0.51
P04213 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P04213 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.85□□□□□ -0.51
P04213 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Gm38158-201ENSMUST00000194617 339 ntBASIC11.85□□□□□ -0.51
P04213 Gm37008-201ENSMUST00000195712 319 ntBASIC11.85□□□□□ -0.51
P04213 Gm42599-201ENSMUST00000201308 469 ntBASIC11.85□□□□□ -0.51
P04213 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P04213 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.85□□□□□ -0.51
P04213 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.85□□□□□ -0.51
P04213 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04213 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.85□□□□□ -0.51
P04213 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
P04213 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.84□□□□□ -0.51
P04213 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.84□□□□□ -0.51
P04213 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
P04213 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.84□□□□□ -0.51
P04213 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.84□□□□□ -0.51
P04213 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Mir1982-201ENSMUST00000157368 74 ntBASIC11.84□□□□□ -0.51
P04213 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.84□□□□□ -0.51
P04213 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.84□□□□□ -0.51
P04213 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.84□□□□□ -0.51
P04213 Gm4034-201ENSMUST00000187674 480 ntBASIC11.84□□□□□ -0.51
P04213 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.84□□□□□ -0.51
P04213 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.84□□□□□ -0.51
P04213 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.84□□□□□ -0.51
P04213 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.84□□□□□ -0.51
P04213 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.84□□□□□ -0.51
P04213 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.84□□□□□ -0.51
P04213 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04213 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.84□□□□□ -0.51
P04213 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04213 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04213 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04213 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P04213 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P04213 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P04213 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P04213 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.83□□□□□ -0.52
P04213 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.83□□□□□ -0.52
P04213 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P04213 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.83□□□□□ -0.52
P04213 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P04213 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.83□□□□□ -0.52
P04213 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms