Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Syn1O88935 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.76□□□□□ -0.37
Syn1O88935 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.76□□□□□ -0.37
Syn1O88935 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gm12291-201ENSMUST00000121627 311 ntBASIC12.76□□□□□ -0.37
Syn1O88935 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gm8100-201ENSMUST00000182906 988 ntBASIC12.76□□□□□ -0.37
Syn1O88935 Gm3332-201ENSMUST00000189337 928 ntBASIC12.76□□□□□ -0.37
Syn1O88935 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Gm45856-201ENSMUST00000212752 416 ntBASIC12.76□□□□□ -0.37
Syn1O88935 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.76□□□□□ -0.37
Syn1O88935 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Syn1O88935 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Syn1O88935 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syn1O88935 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Syn1O88935 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syn1O88935 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Syn1O88935 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Gm7541-201ENSMUST00000118361 535 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Gm14921-201ENSMUST00000118643 908 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Gm14219-201ENSMUST00000120414 288 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Syn1O88935 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.75□□□□□ -0.37
Syn1O88935 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Gm27530-201ENSMUST00000184096 98 ntBASIC12.75□□□□□ -0.37
Syn1O88935 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Gm37299-201ENSMUST00000193951 826 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.75□□□□□ -0.37
Syn1O88935 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.75□□□□□ -0.37
Syn1O88935 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.75□□□□□ -0.37
Syn1O88935 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Syn1O88935 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.75□□□□□ -0.37
Syn1O88935 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Syn1O88935 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Gm9996-201ENSMUST00000070359 913 ntBASIC12.75□□□□□ -0.37
Syn1O88935 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syn1O88935 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms