Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.79□□□□□ -0.84
Efnb3O35393 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm23363-201ENSMUST00000175024 79 ntBASIC9.79□□□□□ -0.84
Efnb3O35393 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.79□□□□□ -0.84
Efnb3O35393 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Efnb3O35393 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.79□□□□□ -0.84
Efnb3O35393 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.79□□□□□ -0.84
Efnb3O35393 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Efnb3O35393 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Efnb3O35393 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.79□□□□□ -0.84
Efnb3O35393 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Efnb3O35393 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Efnb3O35393 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm14928-201ENSMUST00000120198 477 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 Gm15703-201ENSMUST00000120250 880 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm6745-201ENSMUST00000199216 526 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 Gm9794-201ENSMUST00000202370 423 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.78□□□□□ -0.84
Efnb3O35393 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.78□□□□□ -0.84
Efnb3O35393 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Efnb3O35393 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Efnb3O35393 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.78□□□□□ -0.84
Efnb3O35393 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Efnb3O35393 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Efnb3O35393 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms