Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hps1O08983 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Hps1O08983 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.56□□□□□ -0.56
Hps1O08983 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.56□□□□□ -0.56
Hps1O08983 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.56□□□□□ -0.56
Hps1O08983 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.56□□□□□ -0.56
Hps1O08983 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.55□□□□□ -0.56
Hps1O08983 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Hps1O08983 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.55□□□□□ -0.56
Hps1O08983 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.55□□□□□ -0.56
Hps1O08983 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Hps1O08983 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hps1O08983 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.54□□□□□ -0.56
Hps1O08983 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hps1O08983 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.54□□□□□ -0.56
Hps1O08983 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Gm24196-201ENSMUST00000179161 110 ntBASIC11.54□□□□□ -0.56
Hps1O08983 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Hps1O08983 Gm44364-201ENSMUST00000198368 141 ntBASIC11.54□□□□□ -0.56
Hps1O08983 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.54□□□□□ -0.56
Hps1O08983 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hps1O08983 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hps1O08983 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms